DynaMO statistics

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Citations per year

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Associated diseases

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DynaMO specifications

Information


Unique identifier OMICS_22316
Name DynaMO
Alternative name dynamic motif occupancy
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data PSFMs or consensus sequences which represent specific sequences TFs recognize and alignments of ChIP-seq reads.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Version 1.0
Stability Stable
Maintained Yes

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Maintainers


  • person_outline Hongkai Ji <>
  • person_outline Jef Boeke <>

Publication for dynamic motif occupancy

DynaMO in publication

PMCID: 5634782
PMID: 28949295
DOI: 10.7554/eLife.29938.025

[…] stress response tfs (; ). that probably explains why many stress response tfs, such as gis1, mig1/2/3, and msn2/4, that target metabolic enzymes were identified in the rc/quiescent phase of ymc by dynamo (). therefore, this study seemingly uncover a critically important secondary mechanism for stress response – in the quiescent state, remodeling metabolic activities and activating stress […]


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DynaMO institution(s)
Institute for Systems Genetics, NYU Langone Medical Center, New York City, NY, USA; Department of Biochemistry and Molecular Pharmacology, NYU Langone Medical Center, New York City, NY, USA; Department of Biostatistics, Johns Hopkins University Bloomberg School of Public Health, Baltimore, MD, USA
DynaMO funding source(s)
Supported by National Institutes of Health (NIH) [U54GM103520, R01HG006841, R01HG006282].

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