E-coli PPI statistics

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Citations per year

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Associated diseases

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E-coli PPI specifications

Information


Unique identifier OMICS_14655
Name E-coli PPI
Interface Web user interface
Restrictions to use None
Input data The gene or protein name.
Output data The module name, the module image and the coexpression module image.
Computer skills Basic
Stability Stable
Maintained Yes

Taxon


  • Bacteria
    • Escherichia coli

Documentation


Maintainer


  • person_outline Mohammad Ganjtabesh <>

Publication for E-coli PPI

E-coli PPI in publications

 (2)
PMCID: 3098085
PMID: 20939873
DOI: 10.1186/1471-2105-11-505

[…] on the other hand, 1,192 proteins in the yeast hc ppi network were members of merged rnn clusters., we also compared different cluster centrality measures on other yeast ppi networks, as well as an e.coli ppi network. results from these ppi networks indicated that rnn cluster centrality and go term clique centrality gave consistently higher precision values (additional file , figure s5). […]

PMCID: 2718641
PMID: 18586721
DOI: 10.1093/bioinformatics/btn163

[…] vary among the most complete ppi networks available via the database of interacting proteins (xenarios et al., ). compares the normalized treelet distributions of the yeast, h.pylori and e.coli ppi networks (in fact their largest connected components). although all three ppi networks of unicellular organisms are quite similar with respect to normalized treelet distributions, […]


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E-coli PPI institution(s)
Department of Computer Science, School of Mathematics, Statistics, and Computer Science, University of Tehran, Tehran, Iran

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