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E-TRA specifications

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Unique identifier OMICS_25960
Name E-TRA
Alternative name Exact Tandem Repeats Analyzer
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Windows
Programming languages C++
Computer skills Advanced
Maintained No

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Publication for Exact Tandem Repeats Analyzer

E-TRA citations

 (6)
library_books

A pilot randomized trial of conventional versus advanced pelvic floor exercises to treat urinary incontinence after radical prostatectomy: a study protocol

2015
BMC Urol
PMCID: 4574075
PMID: 26377550
DOI: 10.1186/s12894-015-0088-4

[…] r and its surrounding structures. Studies have reported a higher maximal voluntary contraction of the pelvic floor when training the pelvic floor muscles and its surrounding muscles simultaneously (i.e. TrA, hip adductors, gluteal, diaphragm) [–]. These advanced pelvic floor training techniques include Pfilates and Hypopressives that also engage the TrA, rectus abdominis, gluteals, diaphragm, and […]

library_books

Arsenic Speciation in Fish Products and Seafood as a Prerequisite for Proper Risk Assessment

2015
PMCID: 5076625
PMID: 27800381
DOI: 10.4081/ijfs.2015.4577

[…] relativamente maggiori per l’Asinorg si hanno nei Cuori (Cerastoderma glaucum), cui seguono i granchi da moleca (Carcinus aestuarii), mentre tutte le altre specie presentano concentrazioni inferiori e tra loro confrontabili. I risultati del presente studio sono coerenti con quanto riporta la letteratura (Neff, ; De Gieter et al., ; Sörös et al., ; Larsen et al., ; Sloth et al., ; Greene e Creceli […]

library_books

Clustering Nuclear Receptors in Liver Regeneration Identifies Candidate Modulators of Hepatocyte Proliferation and Hepatocarcinoma

2014
PLoS One
PMCID: 4130532
PMID: 25116592
DOI: 10.1371/journal.pone.0104449

[…] e novel, and their meaning need to be addressed in more comprehensive studies.RF analysis allowed us to highlight, in order of importance, the NRs most consistently modified in proliferating liver (i.e. Trα, Fxrβ and Pparδ). RF is considered a highly accurate classifier, characterized by many decision trees and outputs. The algorithm allows detecting the discrimination ability of a specific datase […]

library_books

Identification of thyroid hormone receptor binding sites in developing mouse cerebellum

2013
BMC Genomics
PMCID: 3716714
PMID: 23701648
DOI: 10.1186/1471-2164-14-341

[…] soforms of thyroid hormone receptors (TRs) to initiate gene expression. TRs are encoded by two genes, Thra and Thrb that are expressed as TRα and TRβ. Each of these has alternative splice variants, i.e. TRα1, TRα2, THRβ1 and TRβ2 []. TR often binds in the presence of another TR or nuclear receptor (e.g. retinoid X receptor [RXR]) to form a stable DNA binding dimer or multimer []. Classic TH signal […]

library_books

Conservation and Sex Specific Splicing of the transformer Gene in the Calliphorids Cochliomyia hominivorax, Cochliomyia macellaria and Lucilia sericata

2013
PLoS One
PMCID: 3567074
PMID: 23409170
DOI: 10.1371/journal.pone.0056303

[…] ta, B. oleae and A. obliqua have complex splicing patterns, several male-specific exons and differ in the number and relative location of TRA/TRA2 sites , , . The blowfly tra genes all contain a single TRA/TRA2 site near the 3′ end of the male exon. Interestingly, there is also at least one TRA/TRA2 site in the male exon that is immediately downstream of the first protein coding exon (exon 1 in bl […]

library_books

The Fine Tuning of Pain Thresholds: A Sophisticated Double Alarm System

2010
PLoS One
PMCID: 2859063
PMID: 20428245
DOI: 10.1371/journal.pone.0010269

[…] e plane [T0, α] (). The borderline case is characterized by the fact that the reaction time and the apparent threshold are identical, whatever the type of fiber that triggers the experimental pain: i.e. tRA = tRC = tRAC and ATA = ATC = ATAC. For a given T0 value, the response is elicited for a particular α value that we will refer to as αAC.Thus, according to equations 1b and 1a, the moments of th […]

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E-TRA institution(s)
Akdeniz University, Faculty of Agriculture, Antalya, Turkey
E-TRA funding source(s)
Supported by the Scientific Research Projects Administration Unit of Akdeniz University (Project No: 2003.01.0104.001).

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