Similar protocols

Protocol publication

[…] The sequences of the MgtA homologs were identified using the HMMER web server () using default settings with ecMgtA (uniprot code P0ABB8) as search sequence. Selected subsets of MgtA homologs were chosen from each kingdom and aligned using MAFFT () and edited manually in Jalview version 2.8.2 (), the phylogenetic three was built in Seaview, using the BioNJ algorithm (). […]

Pipeline specifications

Software tools HMMER, MAFFT, Jalview, SeaView, BIONJ
Application Phylogenetics
Organisms Escherichia coli, Salmonella enterica subsp. enterica serovar Typhimurium
Chemicals Cardiolipins, Magnesium