Dataset features

Specifications


Application: sRNA-seq analysis
Number of samples: 12
Release date: Jan 25 2017
Last update date: Sep 20 2018
Access: Public
Genes: AGO10, AGO1, MARCH8
Taxon: Arabidopsis thaliana
Dataset link ARGONAUTE10 promotes the degradation of miR165/6 through the SDN1 and SDN2 exonucleases in Arabidopsis [AGO10SDN]

Experimental Protocol


Immunoprecipitation of AGO1- and AGO10-RISCs followed by treatment with SDN/SDN-D283A exonucleases (two biological replicates and two treatments for a total of 8 samples). Immunoprecipitation of AGO1- and AGO10-RISCs followed by Mock treatment that included buffer only (i.e., no SDN) (two biological replicates, a total of 4 samples).

Repositories


GEO

GSE87351

ENA

SRP090467

BioProject

PRJNA344474

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Contact


Xuemei Chen

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