Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 4
Release date: Apr 1 2009
Last update date: May 4 2018
Access: Public
Genes: BRD7, SMARCC2, ARID1B, SMARCA4, ADAMTS1, BMI1, CRABP1, ARID1A, SMARCA2
Dataset link Brd7, a novel PBAF-specific SWI/SNF subunit, is required for gene activation and repression in embryonic stem cells

Experimental Protocol


R1 ESCs were infected in duplicates with shRNA targeting Brg1 or GLUT4 (as a control). Knockdown of Brg1 mRNA affected Brg1 protein levels efficiently. RNA was isolated 67 hours post-infection and analyzed using microarrays.

Repositories


GEO

GSE7791

ArrayExpress

E-GEOD-7791

BioProject

PRJNA99817

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Contact


Matthias Kaeser
Matthias D Kaeser