Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 9
Release date: May 9 2017
Last update date: Oct 11 2017
Access: Public
Chemicals: Tetracycline
Dataset link Precise integration of inducible transcriptional elements (PrIITE) enables absolute control of inducible gene expression.

Experimental Protocol


Transcriptome and ChIP-seq analyses of inducible CDX2 integrated expression and wt CDX2 expression in LS174T colorectal cell lines by deep sequencing. In total six transcriptome data set (LS174T_wt; LS174T_CDX+/-; LS174T_CDX2-/-; LS174T_CDX2-/-1X induced CDX2 (4ng Dox); LS174T_CDX2-/-2X induced CDX2 (0ng Dox); LS174T_CDX2-/-2X induced CDX2; 4ng Dox); LS174T_CDX2-/-2X induced CDX2 (40ngDox)) and one ChIP-seq data set (ChIP-seq CDX2 ab)

Repositories


GEO

GSE97273

ENA

SRP102781

BioProject

PRJNA381163

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Contact


Lars Hansen

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