Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 32
Release date: Sep 26 2017
Last update date: Nov 30 2018
Access: Public
Genes: NFIL3, STAT3
Dataset link The intestinal microbiota regulates body composition through NFIL3 and the circadian clock

Experimental Protocol


1. RNAseq analysis of epithelial cell transcripts in Nfil3fl/fl and Nfil3ΔIEC mice at 6 time points across a circadian cycle. Laser captured epithelial cells from 3 mice were pooled together for RNAseq at each time point. 2. 16s sequencing analysis of fecal bacterial composition in Nfil3fl/fl and Nfil3ΔIEC mice before and after switching from chow diet to high-fat diet.

Repositories


GEO

GSE100339

ENA

SRP110082

BioProject

PRJNA391374

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