Dataset features

Specifications


Application: SNP array data analysis
Number of samples: 100
Release date: Jun 4 2008
Last update date: May 17 2017
Access: Public
Diseases: Uterine Cervical Neoplasms, Neoplasms
Dataset link Genome-wide SNP Array Identification of Genetic Alterations in Cervical Cancer

Experimental Protocol


We utilized Affymetrix 250K NspI SNP chip for copy number analysis on 7 normal cervical squamous epithelial samples as controls and 85 cervical cancer specimens. The cervical cancer specimens include 9 cervical cancer cell lines and 85 primary tumors. Eight of the primary tumors analyzed as replicates. Primary tumors consist of various stages of invasive cancer and HPV status of all tumors and cell lines is also included.

Repositories


GEO

GSE10092

BioProject

PRJNA108659

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Contact


Murty Vundavalli