Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 13
Release date: Dec 3 2015
Last update date: Oct 16 2017
Access: Public
Computational protocol: ArrayExpress, FASTX-Toolkit, NovoAlign, pyCRAC, Array Suite, limma
Dataset link Loss of the yeast SR protein Npl3 alters gene expression due to transcription readthrough

Experimental Protocol


We assessed the role of Npl3 in transcription termination, by examining the RNA binding profile of Npl3, Nab3 and Rpo21in WT yeast, as well as Nab3 and Rpo21 in npl3∆ yeast. We have included replicates of each sample as well as an untagged 'BY' negative control

Repositories


GEO

GSE70191

ENA

SRP059799

BioProject

PRJNA287824

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Contact


Rebecca Holmes

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