E3Miner specifications


Unique identifier OMICS_05274
Name E3Miner
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained No


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Publication for E3Miner

E3Miner in publications

PMCID: 4895279
PMID: 26818115
DOI: 10.1186/s12918-015-0244-1

[…] regulation of e3 ligase activities and functions may be a promising approach for cancer treatments., many databases and tools have been developed to aid in the study of e3 ligases. for example, e3miner [] offers a text mining approach to identify ubiquitin-protein ligases, whereas e3net [] allows users to search through a collection of 1671 e3-substrate relationships among 493 e3s and 1277 […]

PMCID: 3287473
PMID: 22373085
DOI: 10.1186/1471-2105-12-S14-S8

[…] recently introduced ptm identification method., to attempt identification of ubiquitination from hupo bpp datasets, the list of ubiquitin substrates with ubiquitinated site were collected from e3miner [] with minor tuning and ubiprot []. totally 38 ubiquitin substrates from human or mouse are collected with ubiqutination sites. mass spectra matched with collected list of ubiquitin […]

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E3Miner institution(s)
Department of Computer Science, KAIST, 335 Gwahangno, Yuseong-gu, Daejeon, Korea

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