Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 27
Release date: Aug 17 2018
Last update date: Nov 20 2018
Access: Public
Diseases: Epilepsies, Partial
Dataset link m6A-facilitated hippocampal learning and memory through Ythdf1

Experimental Protocol


(1) The RNA binding targets of Ythdf1 were determined by anti-Ythdf1 antibody CLIP-seq in the adult mouse hippocampal tissue. (2) m6A-modified transcripts were mapped by anti-m6A antibody CLIP-seq using polyA RNA purified from the adult mouse hippocampus. (3) mRNA abundance in wild-type and Ythdf1-KO mouse hippocampus was determined by mRNA-seq. (4) Abundance of m6A-modified transcripts in mouse dentate gyrus before and after electroconvulsive treatment was determined by full length m6A-RIP-seq.

Repositories


GEO

GSE106607

ENA

SRP124463

BioProject

PRJNA417392

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Contact


Chuan He