Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 19
Release date: Jan 15 2015
Last update date: Feb 22 2018
Access: Public
Diseases: Alagille Syndrome
Dataset link Long term culture of genome-stable bipotent progenitor cells from adult human liver

Experimental Protocol


We generated arrays from whole human liver tissue, and human liver derived cultures maintained in our defined medium. Genes 4 fold differentially expressed were used for the clustering analsyis (see matrix 1). For the genes enriched in organoid cultures grown in ERFHNic+A compared to ERFHnic we normalized the arrays by substracting the liver tissue 1 array to the culture arrays. Then we calculated the fold difference between the ERFHNic+A and the ERFHNic samples (see matrix 2).

Repositories


GEO

GSE63859

ArrayExpress

E-GEOD-63859

BioProject

PRJNA269269

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Contact


Meritxell Huch

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