Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 10
Release date: Feb 1 2017
Last update date: Oct 26 2018
Access: Public
Diseases: Breast Neoplasms
Chemicals: Estrogens, Prostaglandins
Dataset link RNA-Seq Analysis of Anacardic Acid Treated MCF7 and MDA-MB-231 Breast Cancer Cell Lines

Experimental Protocol


There are two breast cancer cell lines used in this study, including MCF-7 (invasive breast ductal carcinoma; estrogen receptor positive (ER+); progesterone receptor positive (PR+); human epidermal growth factor 2 negative (HER2-)) and MDA-MB-231 (breast adenocarcinoma; triple negative – ER-; PR-; HER2-). Each of these cell lines was treated with anacardic acid (AnActrt) with three replicates each, resulting in a total of 12 RNA samples. One MDA-MB-231 control sample and one MDA-MB-231 AnActrt treated sample were removed after QA/QC determined they were likely contaminated samples.

Repositories


GEO

GSE78011

ENA

SRP070442

BioProject

PRJNA312354

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Contact


Eric Rouchka