Dataset features

Specifications


Application Gene expression microarray analysis
Number of samples: 12
Release date: Dec 31 2015
Last update date: Mar 31 2016
Access: Public
Diseases: Pneumonia, Lipid, Heart Arrest
Chemicals: Carbon, Silicon, Silicon Dioxide
Dataset link Transcript level coordination of carbon pathways during silicon starvation induced lipid accumulation in the diatom Thalassiosira pseudonana

Experimental Protocol


Analyzed mRNA from cells after 0, 4, 8, 12, 18, and 24 hr of silicon starvation using the Affymetrix GeneChip whole genome tiling array. Initial analysis of gene level expression was performed using the Affymetrix Expression Console Software, version 1.1. No biological replicates were performed. 0 hr is used as a reference point.

Repositories


GEO

GSE75651

ArrayExpress

E-GEOD-75651

BioProject

PRJNA304974

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Contact


Sarah R. Smith