Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 4
Release date: Jun 20 2017
Last update date: Nov 26 2018
Access: Public
Diseases: Adenocarcinoma, Bronchiolo-Alveolar, Influenza, Human, Neoplasms, Glandular and Epithelial
Computational protocol: TopHat, Bowtie2, Cufflinks, IPA
Dataset link Mouse pooled LNEPs, pre- and post-influenza - Local lung hypoxia determines epithelial fate decisions during alveolar regeneration

Experimental Protocol


Highly purified quiescent LNEPs (EpCAMposb4posCC10negFoxJ1neg) and activated LNEPs (Krt5-CreERT2 traced cells 17 days post infection) were flow sorted and extracted for RNA using ReliaPrep™ RNA Tissue Miniprep kit (Promega).

Repositories


GEO

GSE83467

ENA

SRP076708

BioProject

PRJNA326070

Download


Contact


Andrew Vaughan

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