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EagleView | A genome assembly viewer for next-generation sequencing technologies

An information-rich viewer for next-generation genome assembles with data integration capability. EagleView can display a dozen different types of information including base qualities, machine specific trace signals, and genome feature annotations. It provides an easy way for inspecting visually the quality of a genome assembly and validating polymorphism candidate sites (e.g., SNPs) reported by polymorphism discovery tools. It can also facilitate data interpretation and hypothesis generation.

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EagleView classification

EagleView specifications

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Graphical user interface
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Unix/Linux, Mac OS, Windows
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Academic or non-commercial use
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EagleView distribution


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EagleView support


  • Weichun Huang <>


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Department of Biology, Boston College, Chestnut Hill, MA, USA

Funding source(s)

This research was supported by a grant to G.M. (no. R01 HG003698) from the National Human Genome Research Institute, National Institutes of Health.

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