EMDUnifrac specifications

Information


Unique identifier OMICS_19784
Name Earth Movers Distance Unifrac
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Requirements dendropy, numpy, matplotlib, ete2, PyCogent
Maintained Yes

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Maintainers


  • person_outline David Koslicki <>
  • person_outline Jason McClelland <>

Additional information


(McClelland, Koslicki, 2016)EMDUnifrac: Exact Linear Time Computation of the Unifrac Metric and Identification of Differentially Abundant Organisms. arXiv. https://arxiv.org/abs/1611.04634
EMDUnifrac institution(s)
Mathematics Department, Oregon State University, Corvallis, OR, USA

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