EasyGene pipeline

EasyGene specifications

Information


Unique identifier OMICS_16681
Name EasyGene
Interface Web user interface
Restrictions to use None
Input data A genome sequence.
Output data A list of statistically significant genes.
Computer skills Basic
Version 1.2
Stability Stable
Maintained Yes

Maintainer


  • person_outline Pernille Nielsen <>

Publications for EasyGene

EasyGene IN pipeline

2010
PMCID: 2974192
PMID: 20623278
DOI: 10.1007/s00248-010-9717-3

[…] of the outcome., the predicted proteomes comprising all protein-coding genes were extracted from the genbank files for the published genomes. for unpublished genomes, they were predicted using easygene [30]. all predicted proteomes were compared by blastp reciprocal pairwise comparison. two genes were attributed to a single gene family and considered 'conserved' when they shared at least […]

EasyGene institution(s)
Bioinformatics Centre, Institute of Molecular Biology and Physiology, University of Copenhagen, Universitetsparken 15, Copenhagen, Denmark

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