Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 448
Release date: Nov 6 2014
Last update date: Jun 20 2017
Access: Public
Taxon: Zea mays, Zea mays subsp. parviglumis
Dataset link The Role of cis Regulatory Evolution in Maize Domestication

Experimental Protocol


We assayed genome-wide cis and trans regulatory differences between maize and its wild progenitor, teosinte, using deep RNA sequencing in F1 hybrid and parent inbred lines for three tissue types (ear, leaf and stem) followed by assessment of allele-specific gene expression.

Repositories


GEO

GSE61810

ArrayExpress

E-GEOD-61810

ENA

SRP047528

BioProject

PRJNA262181

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Contact


John Doebley

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