Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 48
Release date: Dec 9 2015
Last update date: Mar 9 2016
Access: Public
Dataset link Transcriptome profiling of genetically modified P. falciparum parasite strains with distinct drug resistance phenotypes

Experimental Protocol


We conducted gene expression microarrays over the course of the parasite 48-hr IDC, by sampling parasites every 6-hour, representing 8 different time points. Extracted RNA was labeled with Cy5 dye, while the reference RNA pool consisted of Cy3-coupled cDNA samples prepared from RNAs representing all developmental stages at 6-hour intervals of the IDC of the 3D7 line.

Repositories


GEO

GSE75807

ArrayExpress

E-GEOD-75807

BioProject

PRJNA305412

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Contact


David Fidock

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