Computational protocol: Identification and Characterization of Bifunctional Proline Racemase/Hydroxyproline Epimerase from Archaea: Discrimination of Substrates and Molecular Evolution

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Protocol publication

[…] Protein sequences were analyzed using the Protein-BLAST and Clustal W program distributed by DDBJ (DNA Data Bank of Japan) (www.ddbj.nig.ac.jp). The phylogenetic tree was produced using the TreeView 1.6.1. program. […]

Pipeline specifications

Software tools DELTA-BLAST, Clustal W, TreeViewX
Databases DDBJ
Applications Phylogenetics, Amino acid sequence alignment
Organisms Thermococcus litoralis
Diseases Galactosemias
Chemicals Pyridoxal Phosphate