EC specifications

Information


Unique identifier OMICS_11000
Name EC
Alternative name Error Corrector
Software type Application/Script
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Publication for Error Corrector

EC citation

library_books

Analytical parameters and validation of homopolymer detection in a pyrosequencing based next generation sequencing system

2018
BMC Genomics
PMCID: 5822529
PMID: 29466940
DOI: 10.1186/s12864-018-4544-x

[…] equences and the algorithm uses a dynamically updated cluster consensus when aligning reads []. Coral and ECHO are multiple alignment based techniques [], while HECTOR is a homopolymer spectrum based error corrector, with a multistage correction workflow []. Another useful software is FlowClus, which provides feedback on the denoising process, allowing the user to apply more suitable analysis para […]

EC institution(s)
Department of Computer Science & Engineering, University of Connecticut, Storrs, CT, USA
EC funding source(s)
This work has been supported in part by the following grants: NIH R01-LM010101 and NSF 1447711.

EC reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review EC