Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 6
Release date: Oct 11 2017
Last update date: Nov 30 2018
Access: Public
Diseases: Glioma
Chemicals: Glutamic Acid
Genes: SLC7A11, Cdm, REST
Dataset link Role of the glial glutamate exchanger xCT in ventral hippocampus in resilience to stress

Experimental Protocol


Ventral dentate gyrus RNA from 3 biological replicates per group (Not-stressed Controls or Ctrl and Chronic Restrained Stress or CRS, all male mice) was used for library prep (TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat) and sequenced on Illumina HiSeq2500 at the Genomic Core facility at The Rockefeller University. Each sample was provided with a unique adapter and all samples were put in the same pool and run in multiple lanes to control for lane effects with a sequencing depth of about 30M (100bp, single end).

Repositories


GEO

GSE103435

ENA

SRP116945

BioProject

PRJNA401858

Download


Contact


Carla Nasca