Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 30
Release date: Feb 29 2016
Last update date: Oct 18 2018
Access: Public
Genes: PTPN11
Taxon: Arabidopsis thaliana
Dataset link Temporal and spatial domain-specific transcriptomic analysis of a vital reproductive meristem in Arabidopsis thaliana

Experimental Protocol


Four samples (YFP-positive, YFP-negative, all-sorted, and non-sorted). Four biological replicates of each sample (except YFP-positive, collected in triplicated). Strand-specific libraries were sequenced (single-end) in two lanes of a HiSeq 2500 Illumina flow cell (each lane was later analyzed as a technical replicate).

Repositories


GEO

GSE74458

ArrayExpress

E-GEOD-74458

ENA

SRP065450

BioProject

PRJNA300452

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Contact


Robert Franks