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EcoCyc | Adapting EcoCyc for use on the World Wide Web


A scientific database for the bacterium Escherichia coli K-12 MG1655. The EcoCyc project performs literature-based curation of the entire genome, and of transcriptional regulation, transporters, and metabolic pathways. New experimental discoveries about gene products, their function and regulation, new metabolic pathways, enzymes and cofactors are regularly added to EcoCyc. SmartTable tools allow users to browse collections of related EcoCyc content. SmartTables can also serve as repositories for user- or curator-generated lists. EcoCyc supports running and modifying E. coli metabolic models directly on the EcoCyc website.

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EcoCyc classification

  • Eubacteria
    • Escherichia coli

EcoCyc specifications

Unique identifier:
Community driven:
User data submission:
Not allowed
Restrictions to use:
Data access:
File download, Browse

EcoCyc support



  • Ingrid M. Keseler <>


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SRI International, Menlo Park, CA, USA; Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, NSW, Australia; Programa de Genómica Computacional, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mexico

Funding source(s)

National Institute of General Medical Sciences of the National Institutes of Health under Award Numbers U24GM077678 and R01GM110597, NIH grant GM077678 from the NIH National Institute of General Medical Sciences

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.