Provides users with detailed synteny structure interconnecting pair of genomes. ECRbase is a portal to pre-computed, post-processed whole-genome comparative data that allows the extraction of evolutionary conserved regions (ECRs). It promotes sequences as well as the transcription factor binding sites (TFBSs) associated with them, for all available vertebrate genomes. This resource allows for constant growth to accommodate the dynamic nature of genome research where newly emerging genomes.
CMLS, Computation Directorates, Lawrence Livermore National Laboratory, Livermore, CA, USA
ECRbase funding source(s)
Supported by LLNL LDRD-04-ERD-052 grant, LLNL LDRD-06-ERD-004 grant and the United States Department of Energy by the University of California, Lawrence Livermore National Laboratory Contract W-7405-Eng-48.