Dataset features

Specifications


Application: aCGH data analysis, SNP array data analysis
Number of samples: 52
Release date: May 1 2014
Last update date: May 17 2017
Access: Public
Diseases: Neoplasms
Dataset link Affymetrix SNP array data for nasopharyngeal carcinoma samples

Experimental Protocol


Affymetrix SNP arrays were performed according to the manufacturer's directions on DNA extracted from fresh frozen nasopharyngeal carcinoma biopsy tissues Copy number analysis of Affymetrix 250K SNP arrays was performed for 52 nasopharyngeal carcinoma samples. Please note that the sample characteristics 'primary tumor size, metastasis, and regional lymph node' represents T, M and N in WHO TNM staging of nasopharyngeal cancer (according to American Joint Committee on Cancer (AJCC)), respectively.

Repositories


GEO

GSE57100

ArrayExpress

E-GEOD-57100

BioProject

PRJNA245424

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Contact


Lizhen Liu