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Protocols

EDAS specifications

Information


Unique identifier OMICS_01885
Name EDAS
Alternative name EST Derived Alternative Splicing database
Restrictions to use None
Maintained Yes

Taxon


  • Primates
    • Homo sapiens

Publication for EST Derived Alternative Splicing database

EDAS citations

 (24)
library_books

Contrast media extravasations in patients undergoing computerized tomography scanning: a systematic review and meta analysis of risk factors and interventions

2018
PMCID: 5771689
PMID: 29324560
DOI: 10.11124/JBISRIR-2017-003348

[…] he effectiveness of accessories to detect extravasation and terminate the injection. These studies involved adults. The first article considered several different extravasation detection accessories (EDAs) and each of the three case studies investigated a different accessory. Because of this heterogeneity the results have been reported with a narrative summary.In a multi-center study, the influenc […]

library_books

The alkalophilic fungus Sodiomyces alkalinus hosts beta and gammapartitiviruses together with a new fusarivirus

2017
PLoS One
PMCID: 5706713
PMID: 29186149
DOI: 10.1371/journal.pone.0187799

[…] web page http://rna.tbi.univie.ac.at.Quantities of dsRNA amount were compared as following: dsRNA was separated on an agarose gel and stained with SYBR Green. The stained RNA was observed using Kodak EDAS 290 system and relative intensity of dsRNA bands, expressed as integrated area of the peak, was compared. Results were averaged from the three independent dsRNA isolations. […]

library_books

Theoretical models of inhibitory activity for inhibitors of protein–protein interactions: targeting menin–mixed lineage leukemia with small molecules† †Electronic Supplementary Information (ESI) available: Detailed characterization of the compound collection; structural characteristics of the menin–MI 2 2 complex; and additional computational results. See DOI: 10.1039/c7md00170c

2017
PMCID: 5774433
PMID: 29456828
DOI: 10.1039/c7md00170c

[…] ods calibrated with classical protein–ligand interactions, such as enzyme–inhibitor complexes., While plausible predictions were obtained with selected empirical scoring approaches, the E(10)EL,MTP + EDas model of inhibitory activity appears to outperform the classical scoring functions presented herein, resulting in remarkable agreement with the experimental data characterized by R = –0.87 and Np […]

library_books

In silico discovery of substituted pyrido[2,3 d]pyrimidines and pentamidine like compounds with biological activity in myotonic dystrophy models

2017
PLoS One
PMCID: 5459475
PMID: 28582438
DOI: 10.1371/journal.pone.0178931

[…] pling, sampling large-amplitude fluctuation events (such as conformational changes upon ligand binding) using this technique is still challenging. On the other hand, elastic network models (ENMs) and EDAs assume that the major collective modes of fluctuation dominate the functional dynamics []. In addition, the ability of this approach to correctly describe rCUGexp dynamics near the equilibrium ha […]

call_split

Phylogenetic Characterization of Marine Benthic Archaea in Organic Poor Sediments of the Eastern Equatorial Pacific Ocean (ODP Site 1225)

2016
PMCID: 5039592
PMID: 27681926
DOI: 10.3390/microorganisms4030032
call_split See protocol

[…] E buffer) and destained for at least 10 min in 0.5× TAE buffer. The gels were photographed on a UV transillumination table (Spectroline®, BI-O-VISION, New Haven, CT, USA) with a digital camera (Kodak EDAS 290). Archaeal DGGE analysis had to be limited to sample 1225-1H1, due to persistent, false-positive DNA amplicons in the negative controls of 1225-1H6. Archaeal DGGE bands of sample 1225-1H1 wer […]

library_books

Overexpression of KLF4 promotes cell senescence through microRNA 203 survivin p21 pathway

2016
Oncotarget
PMCID: 5312384
PMID: 27531889
DOI: 10.18632/oncotarget.11200

[…] ere used to detect specific proteins according to the standard procedures. Finally, the membranes developed with a Luminol Detection System (Santa Cruz). Protein expression was quantified using a Gel EDAS 290 analysis system (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA) and Gel-Pro Analyzer 3.1 software (Media Cybernetics, Silver Spring, MD, USA). […]

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