EDEN statistics

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Citations per year

Number of citations per year for the bioinformatics software tool EDEN
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Tool usage distribution map

This map represents all the scientific publications referring to EDEN per scientific context
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Associated diseases

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Popular tool citations

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EDEN specifications

Information


Unique identifier OMICS_22445
Name EDEN
Alternative name Evolutionary Dynamics within ENvironments
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data Some (meta-)genome DNA sequences.
Input format FASTA
Operating system Unix/Linux, Mac OS, Windows
Programming languages Perl, Python, Shell (Bash)
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

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Versioning


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Maintainer


  • person_outline Alice McHardy

Publication for Evolutionary Dynamics within ENvironments

EDEN citation

call_split

EDEN: evolutionary dynamics within environments

2017
Bioinformatics
PMCID: 5860032
PMID: 28637301
DOI: 10.1093/bioinformatics/btx394
call_split See protocol

[…] EDEN is provided as a Docker image, which is a virtualization of the application that includes everything needed to run the program () (). Other than Docker, no further software has been installed. ED […]


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EDEN institution(s)
Computational Biology of Infection Research, Helmholtz Centre for Infection Research, Brunswick, Germany; Max von Pettenkofer-Institute for Hygiene and Clinical Microbiology, Ludwig-Maximilian University of Munich, Munich , Germany; German Centre for Infection Research (DZIF), Partner Site Hanover-Brunswick, Brunswick, Germany; DZIF, Partner Site LMU Munich, Munich, Germany; Department of Algorithmic Bioinformatics, Heinrich Heine University Dusseldorf, Dusseldorf, Germany; Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University Dusseldorf, Dusseldorf, Germany

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