EditR specifications

Information


Unique identifier OMICS_23486
Name EditR
Alternative name Edit Deconvolution by Inference of Traces in R
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A Sanger sequencing file of a base edited sample and the sequence of the gRNA protospacer.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Branden Moriarity <>

Publication for Edit Deconvolution by Inference of Traces in R

EditR institution(s)
Masonic Cancer Center, University of Minnesota, Minneapolis, MN, USA; Department of Pediatrics, University of Minnesota, Minneapolis, MN, USA; Center for Genome Engineering, University of Minnesota, Minneapolis, MN, USA; University of Minnesota, Minneapolis, MN, USA; Department of Plant Biology, University of Minnesota, Minneapolis, MN, USA; Genomics Center, University of Minnesota, Minneapolis, MN, USA; University of Minnesota Informatics Institute, Minneapolis, MN, USA
EditR funding source(s)
Supported by the Sobiech Osteosarcoma Fund Award, The Jimmy V Foundation, and the Children’s Cancer Research Fund.

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