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Educational websites (NGS and microarray)

Educational websites with particular attention to NGS and microarray technologies.

DSAIDE
Desktop

DSAIDE Dynamical Systems Approach to Infectious Disease Epidemiology

Allows students to learn infectious disease concepts by using a modern…

Allows students to learn infectious disease concepts by using a modern computational and modeling approach while not requiring students to read or write computer code. DSAIDE permits users to explore…

eBiokit
Nontypeable

eBiokit

Offers wide range of services and repositories widely used in genomic research…

Offers wide range of services and repositories widely used in genomic research as well as documentation and material for training. eBiokit is a portable bioinformatics educational platform reducing…

Informatics…
Desktop

Informatics for RNA-seq

Stores code and certain raw materials for a detailed RNA-seq tutorial.…

Stores code and certain raw materials for a detailed RNA-seq tutorial. Informatics for RNA-seq is an educational tutorial and working demonstration pipeline for RNA-seq analysis including an…

The Clinical…
Mobile

The Clinical Atlas of Intravascular Optical Coherence Tomography

Offers an interactive guidance to a systematic and scientifically critical…

Offers an interactive guidance to a systematic and scientifically critical interpretation of optical coherence tomography (OCT) images. The Clinical Atlas of Intravascular OCT consists of eight…

The NGS…
Dataset

The NGS WikiBook

A collaborative next-generation sequencing (NGS) resource. Users can search,…

A collaborative next-generation sequencing (NGS) resource. Users can search, browse, edit and create new content, so as to facilitate self-learning and feedback to the community. The overall…

ISCB
Nontypeable

ISCB International Society for Computational Biology

A scholarly society for advancing understanding of living systems through…

A scholarly society for advancing understanding of living systems through computation and for communicating scientific advances worldwide. The ISCB serves its global membership by providing…

Bioinformatics@…
Nontypeable

Bioinformatics@school

A pilot project to use bioinformatics-based research activities in high schools.

A pilot project to use bioinformatics-based research activities in high schools.

SentimentVis…
Web

SentimentVis Browser

Presents a list of visualization technique thumbnails organized in a grid.…

Presents a list of visualization technique thumbnails organized in a grid. SentimentVis Browser is a web application allowing users to access to category statistics and a summary table with an…

BioVis Explorer
Web

BioVis Explorer

Allows the investigation of visualization methods in intuitive ways based on…

Allows the investigation of visualization methods in intuitive ways based on filtering. BioVis Explorer is a web application informing users about visualization techniques. This method assists users…

ClusterEnG
Web

ClusterEnG Clustering Engine for Genomics

Clusters big data and interactive visualizations including 3D views, cluster…

Clusters big data and interactive visualizations including 3D views, cluster selection and zoom features. ClusterEnG aims at educating the user about the similarities and differences between various…

TeachEnG
Web

TeachEnG Teaching Engine for Genomics

Provides interactive modules to help students and researchers understand key…

Provides interactive modules to help students and researchers understand key bioinformatics concepts. TeachEnG is an interactive online educational tool for reinforcing key concepts in sequence…

GOBLET
Nontypeable
DECIDE
Nontypeable

DECIDE Decision-aid & E-Counselling for Inherited Disorder Evaluation

Allows creation of clinical decision aids. DECIDE facilitates supportive…

Allows creation of clinical decision aids. DECIDE facilitates supportive functions of a genetic counsellor through patient-centred education and enhanced decision-making. It enables users to work…

VehlowEtAl2015
Dataset

VehlowEtAl2015

Informs users on the various existing visualization techniques. This online…

Informs users on the various existing visualization techniques. This online library brings a meaningful overview of graph structures, to highlight central objects, to show similar objects, and to…

SetViz
Dataset

SetViz

Informs users about visualization techniques. SetViz is an online platform…

Informs users about visualization techniques. SetViz is an online platform providing information and classifying set visualization techniques into six categories. The techniques in each category…

Text…
Web

Text Visualization Browser

Informs about text visualization techniques. Text Visualization Browser is a…

Informs about text visualization techniques. Text Visualization Browser is a web application that can be used for getting an overview of the field, teaching purposes, and finding related work based…

Research…
Desktop

Research Objects

Maps the landscape of initiatives and activity in the development of Research…

Maps the landscape of initiatives and activity in the development of Research Objects. Research Objects also aims to exchange of scholarly information on the Web. It improves the potential for…

CGS
Web

CGS Classical Genetics Simulator

Offers the opportunity to perform controlled crosses with model organisms. CGS…

Offers the opportunity to perform controlled crosses with model organisms. CGS provides populations of Drosophila, Arabidopsis or mice with unknown patterns of inheritance and gives students the…

SAT
Desktop

SAT Sequence Alignment Teacher

Interactively calculates the Dynamic Programming (DP) matrix in real time. SAT…

Interactively calculates the Dynamic Programming (DP) matrix in real time. SAT also visually illustrates the consequences of tweaking the various parameters of the algorithm. This simple software…

iAnn
Nontypeable

iAnn

An open source community-driven platform for dissemination of life science…

An open source community-driven platform for dissemination of life science events, such as courses, conferences and workshops.

Performance…
Dataset

Performance Visualization

Supplies techniques that assists users in development of software. Performance…

Supplies techniques that assists users in development of software. Performance Visualization is an online library that classifies different technique of visualization and categorizes them. This…

Dynamic Graph…
Dataset

Dynamic Graph Visualization

Classifies existing visualization techniques. Dynamic Graph Visualization…

Classifies existing visualization techniques. Dynamic Graph Visualization covers the evolution of relationship between effective diagrams, entities in readable and scalable. This online library…

HTS Mappers
Dataset

HTS Mappers

This page attempts to provide an up-to-date compendium of HTS mappers initially…

This page attempts to provide an up-to-date compendium of HTS mappers initially provided in the article "Tools for mapping high-throughput sequencing data".

KehrerEtHauser2…
Dataset

KehrerEtHauser2012

Allows users to explore, analyze, and gain insight into such data. This online…

Allows users to explore, analyze, and gain insight into such data. This online database contains several analytical and interactive visual methods allowing users to study multifaceted scientific…

BISE
Nontypeable

BISE Bio Imaging Search Engine

Bise is a bio image information index with several software for bio imaging…

Bise is a bio image information index with several software for bio imaging analysis as Angiogenesis/Sprout Analyzer; SOAX; CLEM; Spot Detector; Matlab; JACoP; ImageJ; Super-Resolution Radial…

RNA_mapping
Desktop

RNA_mapping

Allows to align RNA-sequences to a reference genome. RNA_mapping offers an…

Allows to align RNA-sequences to a reference genome. RNA_mapping offers an overview of a panel of different alignment strategies. It offers a way to performs popular mapping algorithms on data.

Mutate
Desktop

Mutate

Provides a virtual laboratory class for undergraduate students of Genetics in…

Provides a virtual laboratory class for undergraduate students of Genetics in Biology. Mutate emulates the so-called fluctuation test whose aim is to distinguish between spontaneous and adaptive…

Synthetic…
Nontypeable

Synthetic Biology One

Offers free, open and online courses in DNA design. Synthetic Biology One…

Offers free, open and online courses in DNA design. Synthetic Biology One addressed first-year master’s students in a life science background. It provides serious games, courses, lessons, units and…

Seeing Theory
Web

Seeing Theory

Makes statistics more accessible to a wider range of students through…

Makes statistics more accessible to a wider range of students through interactive visualizations. Seeing Theory is a web app that visualizes the fundamental concepts covered in an introductory…

Learn.Genetics
Nontypeable

Learn.Genetics

A nationally and internationally-recognized education program that translates…

A nationally and internationally-recognized education program that translates science and health for non-experts.

DNA from the…
Nontypeable

DNA from the Beginning

Provides animated resources of 75 experiments that contributed to modern…

Provides animated resources of 75 experiments that contributed to modern genetics.

GeneEd
Nontypeable

GeneEd

Resources in genetics education and discovery including labs, experiments and…

Resources in genetics education and discovery including labs, experiments and career information.

Nature Reviews…
Nontypeable

Nature Reviews Genetics Series on study designs

The articles in this series provide detailed advice on the most appropriate and…

The articles in this series provide detailed advice on the most appropriate and up-to-date means for designing experiments, with the aim of helping researchers to maximise the value of their data.

Nature Reviews…
Nontypeable

Nature Reviews Genetics Series on translational genetics

The articles in this series document the many ways in which genetic knowledge…

The articles in this series document the many ways in which genetic knowledge is changing medical practice, by facilitating screening tests, by informing diagnoses and drug prescribing.

NextGenSeq@natu…
Nontypeable

NextGenSeq@nature.com

Provides a feel for the current state of the art in next generation sequencing…

Provides a feel for the current state of the art in next generation sequencing technologies.

GGD
Nontypeable

GGD Getting Genetics Done

Many resources offer a 10,000-foot view of the current trends in the field,…

Many resources offer a 10,000-foot view of the current trends in the field, reviews of various technologies, and guidelines on how to effectively design, analyze, and interpret experiments in human…

Microarrays
Nontypeable

Microarrays

An academic Open Access Journal for microarray technology and applications.

An academic Open Access Journal for microarray technology and applications.

Microarrays.org
Nontypeable

Microarrays.org

A public source for microarray protocols and software.

A public source for microarray protocols and software.

Nature Reviews…
Nontypeable
Nature Reviews…
Nontypeable

Nature Reviews Genetics Series on computational tools

This series contains articles that focus on the application of these software…

This series contains articles that focus on the application of these software tools in genetics and genomics.

Nature Reviews…
Nontypeable

Nature Reviews Genetics Series on non-coding RNA

The articles in this series discuss insights into the biology of non-coding…

The articles in this series discuss insights into the biology of non-coding RNAs of all sizes in a wide range of organisms.

Nature Reviews…
Nontypeable

Nature Reviews Genetics Series on regulatory elements

The articles in this series discuss recent views on regulatory elements,…

The articles in this series discuss recent views on regulatory elements, including their role in evolution and the function of chromatin modifications.

AllSeq
Nontypeable

AllSeq

Find the best Sequencing Service provider for your project.

Find the best Sequencing Service provider for your project.

Bioinformaticsw…
Nontypeable

Bioinformaticsweb

Open Access Bioinformatics Education Resource.

Open Access Bioinformatics Education Resource.

GEN
Nontypeable

GEN

Includes the entire bioproduct life cycle from early-stage R&D, to applied…

Includes the entire bioproduct life cycle from early-stage R&D, to applied research including omics, biomarkers, as well as diagnostics, to bioprocessing and commercialization.

Rosalind
Nontypeable

Rosalind

Permits to learn bioinformatics and program through problem solving. Rosalind…

Permits to learn bioinformatics and program through problem solving. Rosalind offers problems that grows in biological and computational complexity and provides teaching aid and a central homework…

MAGMA
Nontypeable

MAGMA Mini Analysis Guide for Microarrays

In this guide you will find a collection of cook-book like manuals for various…

In this guide you will find a collection of cook-book like manuals for various microarray designs.

BioManager
Web

BioManager

Offers provision of storage facility to contain users sequence and results…

Offers provision of storage facility to contain users sequence and results files. BioManager provides a seamless workstation for bioinformatics analyses. It is designed as an online interface that…

Bio-ITWorld
Nontypeable

Bio-ITWorld

Shows how predictive information is the key to improving the efficiency of drug…

Shows how predictive information is the key to improving the efficiency of drug discovery, all the way through clinical trials.

Information

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