EigenTHREADER statistics

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Citations per year

Number of citations per year for the bioinformatics software tool EigenTHREADER

Tool usage distribution map

This map represents all the scientific publications referring to EigenTHREADER per scientific context
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EigenTHREADER specifications


Unique identifier OMICS_17092
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
License Apache License version 2.0
Computer skills Advanced
Stability Stable
Source code URL http://bioinfadmin.cs.ucl.ac.uk/downloads/eigenTHREADER/?C=D;O=A
Maintained Yes




No version available



  • person_outline Pr. David T. Jones

Publication for EigenTHREADER

EigenTHREADER citations


Improved protein contact predictions with the MetaPSICOV2 server in CASP12

PMCID: 5836854
PMID: 28901583
DOI: 10.1002/prot.25379

[…] s a maximum for the FM targets when N eff approaches 1,500. In these cases, MetaPSICOV2 was able to achieve a precision of 100% for two targets, T0886‐D1 and T0886‐D2. Further to our previous work on EigenTHREADER (Buchan and Jones ), we note that with such high precision over the top L/5 contacts, it should be possible to uniquely specify the fold of the domain. For the FM/TBM targets precision a […]


An overview of comparative modelling and resources dedicated to large scale modelling of genome sequences

Acta Crystallogr D Struct Biol
PMCID: 5571743
PMID: 28777078
DOI: 10.1107/S2059798317008920

[…] econdary-structural fragments and uses a simulated-annealing algorithm to assemble the most probable three-dimensional protein structure (Kleywegt & Jones, 1997). Recently, the Jones group introduced EigenTHREADER, a novel fold-recognition method which combines standard threading methods with their in-house MetaPSICOV contact-prediction constraints method (Buchan & Jones, 2017). Phyre2 (Kelley et […]

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EigenTHREADER institution(s)
Department of Computer Science, University College London, London, UK
EigenTHREADER funding source(s)
Supported by the Biotechnology & Biological Sciences Research Council (BBSRC) UK, Grant BB/M011712/1.

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