ELOPER specifications

Information


Unique identifier OMICS_14751
Name ELOPER
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Paired-end reads
Input format FASTA
Output data Elongated reads
Operating system Unix/Linux, Mac OS, Windows
Programming languages C
License GNU Lesser General Public License version 2.1
Computer skills Advanced
Version 1.2
Stability Stable
Maintained Yes

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  • person_outline Itai Yana <>

Publication for ELOPER

ELOPER in publication

PMCID: 5657622
PMID: 29073143
DOI: 10.1371/journal.pone.0185056

[…] available overlap-based read merging tools for a comprehensive evaluation in this study, the testing methodology precluded the use of pandaseq [], which cannot process reads with renamed headers. eloper [] was tested, but not included, as it was unable to produce fastq files or retain the original read headers., each program was tested for speed, accuracy, and scalability. all testing […]


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ELOPER institution(s)
Department of Biology, Technion–Israel Institute of Technology, Haifa, Israel; Daynix Computing Ltd, Netanya, Israel
ELOPER funding source(s)
This work was supported by Microsoft Research through its PhD Scholarship Programme and an Israel Science Foundation grant 1500/09.

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