An empirical Bayesian EN algorithm for multiple QTL mapping that inherits the efficiency of the previously developed EBlasso algorithm. Simulation results demonstrated that EBEN provided higher power of detection and almost the same false discovery rate compared with EN and EBlasso. Particularly, EBEN can identify correlated QTLs that the other two algorithms may fail to identify.

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EBEN classification

EBEN specifications

Software type:
Package
Restrictions to use:
None
Programming languages:
R
Computer skills:
Advanced
Stability:
Stable
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 2.0
Version:
EBEN version 4.6
Requirements:
R (≥ 2.10)

Publications

  • (Huang et al., 2015) Empirical Bayesian elastic net for multiple quantitative trait locus mapping. Heredity.
    PMID: 25204301

EBEN support

Documentation

Maintainer

Credits

Institution(s)

Department of Electrical and Computer Engineering, University of Miami, Coral Gables, FL, USA

Link to literature

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