EnteriX specifications

Information


Unique identifier OMICS_30606
Name EnteriX
Interface Web user interface
Restrictions to use None
Programming languages Java
Computer skills Basic
Stability Stable
Maintained Yes

Subtools


  • Enteric
  • Maj
  • Menteric

Maintainer


  • person_outline Liliana Florea

Publications for EnteriX

EnteriX citations

 (2)
library_books

MOSAIC: an online database dedicated to the comparative genomics of bacterial strains at the intra species level

2008
BMC Bioinformatics
PMCID: 2607288
PMID: 19038022
DOI: 10.1186/1471-2105-9-498

[…] termed MOSAIC. Several resources have been made available in the area of bacterial comparative genomics (for a review see []), but most are dedicated to a given species or group of species (e.g., the Enterix tools []). Moreover, these resources are often restricted to pairwise genome comparisons (e.g., xBASE2 []). The MOSAIC database is a generalist resource that aims to provide easy access to pai […]

library_books

Systematic determination of the mosaic structure of bacterial genomes: species backbone versus strain specific loops

2005
BMC Bioinformatics
PMCID: 1187871
PMID: 16011797
DOI: 10.1186/1471-2105-6-171

[…] ], Mummer [-] and MGA []. Some of them include graphical interfaces to display and browse genome alignments [,,]. Other resources provide precomputed alignments for genome of related species, such as EnteriX or Colibase for enterobacteria [,].Here we focus on whole genomic sequence alignments in the particular case of strains of single bacterial species. Since the publication of a second strain of […]

EnteriX institution(s)
Informatics Research, Celera/Applied Biosystems, Rockville, MD, USA; Sidney Kimmel Cancer Center, San Diego, CA, USA; Department of Computer Science and Engineering, Pennsylvania State University, University Park, PA, USA
EnteriX funding source(s)
Supported by grant HG-02238 from the National Human Genome Research Institute and grant AI34829.

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