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Enzymer specifications

Information


Unique identifier OMICS_23926
Name Enzymer
Software type Application/Script
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Requirements
NUPACK, Numpy
Maintained Yes

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Versioning


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Maintainers


  • person_outline Kasra Zendi
  • person_outline Nawwaf Kharma

Publication for Enzymer

Enzymer citations

 (3)
library_books

CD109 is identified as a potential nasopharyngeal carcinoma biomarker using aptamer selected by cell SELEX

2016
Oncotarget
PMCID: 5342420
PMID: 27419372
DOI: 10.18632/oncotarget.10530

[…] ature on aptamer binding, 5-8F cells were detached using 0.02% EDTA and incubated with S3 on ice or at 37°C respectively.5-8F cells were washed and detached by 0.25% trypsin, 0.1% proteinase K or non-enzymer buffer, respectively. After being washed for three times with washing buffer, the cells were used for binding assays as described above. The unselected FITC-labeled ssDNA library was used as a […]

library_books

Histidine 352 (His352) and Tryptophan 355 (Trp355) Are Essential for Flax UGT74S1 Glucosylation Activity toward Secoisolariciresinol

2015
PLoS One
PMCID: 4340967
PMID: 25714779
DOI: 10.1371/journal.pone.0116248

[…] The in vitro DNA recombination reaction mixture consisted of 4 µL of 5× reaction buffer, 2 µL of 10× Enzymer mix (Invitrogen), 8 µL of purified PCR product from the mutagenesis reaction, and 6 µL of PCR grade water, for a final volume of 20 µL. The mixture was incubated at room temperature for 10 min […]

library_books

An annotated database of Arabidopsis mutants of acyl lipid metabolism

2014
PMCID: 4371839
PMID: 25487439
DOI: 10.1007/s00299-014-1710-8

[…] riacylglycerol lipases (TAGL), monoacylglycerol lipases (MAGL), GDSL lipases, and proteins harboring an α/β hydrolase motif. A large number of these annotations are based only on sequence homology to enzymer from other organizms and have not been confirmed to be correct for the Arabidopsis genes.Phospholipids are not only major structural components of membranes, but also a reservoir for lipid-sig […]

Citations

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Enzymer institution(s)
Computer Science Department, Concordia University, Montreal, QC, Canada; Centre for Structural and Functional Genomics, Concordia University, Montreal, QC, Canada; Electrical and Computer Engineering Department, Concordia University, Montreal, QC, Canada
Enzymer funding source(s)
Supported by the Canada Foundation for Innovation (CFI), Ministre de l’Economie, de l’Innovation et des Exportations du Quebec (MEIE), RMGA and the Fonds de recherche du Quebec - Nature et technologies (FRQ-NT).

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