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EPD specifications

Information


Unique identifier OMICS_31461
Name EPD
Alternative name Encyclopedia of Proteome Dynamics
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

Subtool


  • KinoViewer

Maintainer


  • person_outline Angus Lamond

Publications for Encyclopedia of Proteome Dynamics

EPD citations

 (4)
library_books

Proteomic analysis of cell cycle progression in asynchronous cultures, including mitotic subphases, using PRIMMUS

2017
eLife
PMCID: 5650473
PMID: 29052541
DOI: 10.7554/eLife.27574.030

[…] ss to the entire dataset described in this study, including the measurements of protein accumulation across the cell cycle, the proteomics data are freely available via several outlets, including the Encyclopedia of Proteome Dynamics (http://www.peptracker.com/epd/) () (). The EPD provides a searchable, open access database containing also proteome measurements from multiple large-scale experiment […]

library_books

Proteomic analysis of the response to cell cycle arrests in human myeloid leukemia cells

2015
eLife
PMCID: 4383314
PMID: 25555159
DOI: 10.7554/eLife.04534.009

[…] data on the proteomic consequences of cell cycle arrest by depositing the data in multiple repositories targeted for different user audiences. The entire protein data set is available online via the Encyclopedia of Proteome Dynamics (http://www.peptracker.com/epd). This is a freely available, searchable resource that also includes data from multiple large-scale proteomics experiments, including m […]

library_books

A perspective on proteomics in cell biology

2014
PMCID: 3989996
PMID: 24284280
DOI: 10.1016/j.tcb.2013.10.010

[…] further increased if entries are extensively tagged with consistent metadata that can be filtered and selected.We have initiated such a scheme by creating a proteomics open data resource, termed the ‘Encyclopedia of Proteome Dynamics’ (EPD) . The EPD is a searchable database that provides access to large-scale proteomics datasets describing subcellular protein localisation, protein turnover rates, […]

library_books

A proteomic chronology of gene expression through the cell cycle in human myeloid leukemia cells

2014
eLife
PMCID: 3936288
PMID: 24596151
DOI: 10.7554/eLife.01630.028

[…] ition, gene-by-gene visualization of the quality-filtered data set of protein and mRNA expression for over 6000 genes analyzed across the cell cycle is provided in a searchable, online format via the Encyclopedia of Proteome Dynamics (EPD) (http://www.peptracker.com/epd) (). This is a web-based tool, part of the PepTracker platform, which aims to visually communicate and disseminate data from larg […]

Citations

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EPD institution(s)
Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow St, Dundee, UK
EPD funding source(s)
Supported by Wellcome Trust and MRC [073980/Z/03/Z, 105024/Z/14/Z, 098503/E/12/Z].

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