EpiCompare specifications

Information


Unique identifier OMICS_18813
Name EpiCompare
Interface Web user interface
Restrictions to use None
Output data Identified regions are displayed on a table whose columns are chr, start, end, and link to WashU Epigenome. For Fisher’s exact test and frequency cutoff method, a summary is provided about the distribution of ranks for identified regions. Links are provided to download unmerged 200bp regions or merged regions which merge neighboring 200bp regions. A link to GREAT analysis for merged regions is also provided.
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Ting Wang <>

Information


Unique identifier OMICS_18813
Name EpiCompare
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

Download


Versioning


Add your version

Documentation


Maintainer


  • person_outline Ting Wang <>

Publication for EpiCompare

EpiCompare institution(s)
Department of Genetics, Center for Genome Sciences and Systems Biology, Washington University School of Medicine, St. Louis, MO, USA
EpiCompare funding source(s)
Supported by the National Institutes of Health [R01HG007354, R01HG007175, R01ES024992, U01CA200060, U24ES026699, U01HG009391] and American Cancer Society Research Scholar [RSG-14-049-01-DMC].

EpiCompare reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review EpiCompare