Epigenomic analysis software tools and databases

Epigenomics applications

For didactic purposes, epigenetic modifications can be grouped into three main categories: DNA methylation, histone modifications and nucleosome positioning (Portela and Esteller, 2010). An altered pattern of epigenetic modifications is central to many common human diseases,…

Epigenomic analysis software tools and databases

Most Recent Tools

BPRMeth
Desktop

BPRMeth

Models methylation profiles and extracts higher order features. BPRMeth uses…

Models methylation profiles and extracts higher order features. BPRMeth uses the Binomial Probit Regression likelihood. The features quantitate precisely notions of shape of a methylation profile.…

iHMS
Data

iHMS

Enables comprehensive query and comparative analysis based on gene names,…

Enables comprehensive query and comparative analysis based on gene names, genomic region locations, histone modification marks and cell types. iHMS is an integrated human histone modification…

MouseBook
Data

MouseBook

Integrates curated information about mutant mouse lines held as live or…

Integrates curated information about mutant mouse lines held as live or cryopreserved stocks from MRC Harwell research and from external data resources. MouseBook can be browsed by catalog or the…

UPD
Data

UPD UniParental Disomy

Collects all available case reports on uniparental disomy (UPD) in clinical…

Collects all available case reports on uniparental disomy (UPD) in clinical cases. UPD is the presence of a chromosome pair derived only from one parent in a disomic cell line. UPD hosts data in…

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