Epigenomic analysis software tools and databases

For didactic purposes, epigenetic modifications can be grouped into three main categories: DNA methylation, histone modifications and nucleosome positioning (Portela and Esteller, 2010). An altered pattern of epigenetic modifications is central to…

Epigenomics applications

Epigenomic analysis software tools and databases

Most Recent Tools

GOAL
Desktop

GOAL

Detects single-nucleotide polymorphisms (SNPs) that regulates expression of…

Detects single-nucleotide polymorphisms (SNPs) that regulates expression of genes. GOAL is based on a Bayesian approach which infers cis regulatory polymorphisms underlying gene expression…

EpiCompare
Desktop
Web

EpiCompare

Identifies regions with epigenomic features specific to combinations of tissue…

Identifies regions with epigenomic features specific to combinations of tissue or cell types. EpiCompare can identify regulatory elements such as enhancers, promoters and regions occupied by…

DIRECTION
Desktop
Kineticstools
Desktop

Kineticstools

Detects DNA modifications from single molecule. Kineticstools can be used in…

Detects DNA modifications from single molecule. Kineticstools can be used in real-time sequencing data. It makes independent comparison of IPDs at each position on the genome, for each strand, and…

Most Popular Tools

iDNA-Methyl
Web

iDNA-Methyl

Identifies DNA methylation sites via pseudo trinucleotide composition. We…

Identifies DNA methylation sites via pseudo trinucleotide composition. We anticipate that the iDNA-Methyl predictor will become a useful high-throughput tool because (i) information of DNA…

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