Epigram statistics

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Epigram specifications

Information


Unique identifier OMICS_14546
Name Epigram
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Wei Wang <>

Publications for Epigram

Epigram in publication

PMCID: 5068762
PMID: 26575220
DOI: 10.1038/tp.2015.169

[…] enrichment and comparative matching of de novo sequences, five databases were combined, transfac, jaspar, uniprobe, hpdi and taipale. de novo motifs were compared against a total of 3764 motifs by epigram using k-mer features with lasso regularization to characterize motifs associated with h3k4me3 in neun+ nuclei. tomtom (version 4.9.1) tool from the meme suite was used to identify nearest […]


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Epigram institution(s)
Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA, USA; Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA, USA
Epigram funding source(s)
This work was partially supported by NIH (U01 ES017166).

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