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EpiLoc specifications

Information


Unique identifier OMICS_05410
Name EpiLoc
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained No

Publication for EpiLoc

EpiLoc citations

 (6)
library_books

Taxonomic revision of Pachyptera (Bignonieae, Bignoniaceae)

2018
PMCID: 5799743
PMID: 29416412
DOI: 10.3897/phytokeys.92.20987

[…] . Krukoff 12511 (INPA); Iranduba, Estrada entre Novo Airão e Manacapurú, 2°54'46.6"S, 60°57'58.8"W, fl., L.H. Fonseca 327 (SPF); Itacoatiara, Rio Solimões, West of Itacoatiara, brazilnut plantattion, EPILOC360, 3°00'S 58°45'W, 100 m, 15 Jan 1990, fr., A.H. Gentry 69107 (MO); Manaus, Mar 1907, fr., M. Labroy 1906 (P); Ibid., 30 July 1929, fl., A. Sucre s.n. (R, RB); Ibid., 30 July 1929, fl., fr., A […]

library_books

Is the cardiac monitoring function related to the self in both the default network and right anterior insula?

2016
PMCID: 5062094
PMID: 28080963
DOI: 10.1098/rstb.2016.0004

[…] all images were normalized to Montreal Neurological Institute (MNI) space using SPM12. The automatic electrode localization was verified visually and corrected if necessary using an interactive tool (EpiLoc toolbox developed by the STIM (Stereotaxy: Techniques, Images, Models) engineering platform (http://icm-institute.org/en/cenir-stim-stereotaxy-core-facility-techniques-images-models-2/) in the […]

library_books

Voluntary control of intracortical oscillations for reconfiguration of network activity

2016
Sci Rep
PMCID: 5093688
PMID: 27808225
DOI: 10.1038/srep36255

[…] () was confirmed by the co-registration of the postoperative computed tomography scans with the preoperative 1, 5 Tesla MRI. The MNI coordinates of each contact were recovered automatically using the EpiLoc toolbox developed by the STIM (Stereotaxy: Techniques, Images, Models) (http://pf-stim.cricm.upmc.fr) facility at the Institut du Cerveau et de la Moelle Epinière and confirmed by visual inspec […]

library_books

Molecular characterization and expression pattern of a novel Keratin associated protein 11.1 gene in the Liaoning cashmere goat (Capra hircus)

2016
Asian-Australas J Anim Sci
PMCID: 5337911
PMID: 27383810
DOI: 10.5713/ajas.16.0078

[…] tion, was found using Pfam. This domain was also found in human and cattle. The deduced signal peptide was identified using SignalP and a subcellular localization prediction was carried out using the EpiLoc program. The results showed that KAP11.1 lacked a signal peptide, and it was most likely located in the cytoplasm (). This prediction was in accordance with the result of Transmembrane domain p […]

library_books

Protein Function Prediction using Text based Features extracted from the Biomedical Literature: The CAFA Challenge

2013
BMC Bioinformatics
PMCID: 3584852
PMID: 23514326
DOI: 10.1186/1471-2105-14-S3-S14

[…] sis to identify abstracts that describe associations between transcription factor proteins and GO categories.Another text-based prediction system that is strongly related to the one presented here is EpiLoc []. EpiLoc is a text-based classification system that is used to predict protein subcellular localization. In that work, protein information was collected from the curated database UniProtKB/Sw […]

library_books

Linking genes to literature: text mining, information extraction, and retrieval applications for biology

2008
Genome Biol
PMCID: 2559992
PMID: 18834499
DOI: 10.1186/gb-2008-9-s2-s8

[…] thylation and association with cancer. Knowledge about the subcellular location of proteins can provide meaningful contextual information about potential interaction partners or protein function. The EpiLoc system [] constitutes a text-based subcellular location prediction tool, effectively complementing alternative sequence-based localization prediction algorithms.Mining the literature also offer […]

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EpiLoc institution(s)
School of Computing, Queen's University Kingston, ON, Canada

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