epiMINE statistics

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Citations per year

Citations chart

Popular tool citations

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Tool usage distribution map

Tool usage distribution map

Associated diseases

Associated diseases

epiMINE specifications


Unique identifier OMICS_13854
Name epiMINE
Software type Application/Script
Interface Command line interface, Graphical user interface
Restrictions to use None
Input data A file with set of target regions, a tab separated file with all chromosomes and its length
Input format BED, BAM
Operating system Unix/Linux, Mac OS
Programming languages Python
Computer skills Advanced
Version 2.25
Stability Stable
Rpy2, PySam, pybedtools, wxPython, gplots, ggplot2, RColorBrewer, FactoMineR, kernlab, bnlearn, igraph, fastcluster, caret, ROCR, bedtools
Maintained Yes


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Publication for epiMINE

epiMINE in publication

PMCID: 3892269
PMID: 24455084
DOI: 10.4317/jced.51136

[…] resistance of the other materials was as follows: the poly (methyl methacrylate) materials, caulk™ temporary bridge resin and g-c unifast™ temporary resin; the composite material, protemp™; and the epimine material, scutan™ ()., similar results were obtained by scherrer et al () and haselton et al (). however koumjian et al, () concluded that even though no data were available to compare […]

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epiMINE institution(s)
Department of Experimental Oncology, European Institute of Oncology, Milan, Italy
epiMINE funding source(s)
The work in the Pasini laboratory was supported by grants from the Italian Association for Cancer Research (AIRC), the Italian Ministry of Health, the Umberto Veronesi Foundation (FUV) and by fellowships from the Italian Foundation for Cancer Research (FIRC).

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