Epitopemap specifications

Information


Unique identifier OMICS_09481
Name Epitopemap
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
License Apache License version 2.0
Computer skills Advanced
Stability Stable
Requirements
web2py, ncbi-blast+ tools, Python-pandas, Python-bokeh
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Stephen V. Gordon

Information


Unique identifier OMICS_09481
Name Epitopemap
Interface Web user interface
Restrictions to use Academic or non-commercial use
Programming languages Python
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Stephen V. Gordon

Publication for Epitopemap

Epitopemap citations

 (2)
library_books

Lysosome dependent cell death and deregulated autophagy induced by amine modified polystyrene nanoparticles

2018
Open Biol
PMCID: 5936715
PMID: 29643148
DOI: 10.1098/rsob.170271

[…] Programme of the Irish Government's PRTL4, National Development Plan 2007–2013 (F.W. and A.S.), BFU2015-65623 and FEDER (P.B.). Additionally, it was supported by the ESF Research Networking Programme EpitopeMap (F.W.). F.W. was a recipient of a post-doctoral fellowship from the University of Strasbourg Institute for Advanced Study (USIAS). Finally, we acknowledge the support of the TRANSAUTOPHAGY […]

library_books

Integrated computational prediction and experimental validation identifies promiscuous T cell epitopes in the proteome of Mycobacterium bovis

2016
Microb Genom
PMCID: 5320590
PMID: 28348866
DOI: 10.1099/mgen.0.000071

[…] ludes the lists of binders generated from each prediction method for the entire proteome.Individual prediction results for any protein in the M. bovis genome can be visualised at http://enzyme.ucd.ie/epitopemap using the Epitopemap web application (). Login details are given in Appendix S1. […]

Epitopemap institution(s)
School of Veterinary Medicine, University College Dublin, Belfield, Dublin, Ireland

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