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Information
| Unique identifier | OMICS_29781 |
|---|---|
| Name | ePoPe |
| Alternative name | efficient Prediction of Paralog Evolution |
| Software type | Application/Script |
| Interface | Command line interface |
| Restrictions to use | None |
| Input data | An alignment file, a tree file and a weigh array file. |
| Operating system | Unix/Linux |
| Programming languages | C |
| License | GNU General Public License version 3.0 |
| Computer skills | Advanced |
| Version | 2.0 |
| Stability | Stable |
| Maintained | Yes |
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- person_outline Jana Hertel
ePoPe citations
(4)Neurodevelopmental outcome at 2 years for preterm children born at 22 to 34 weeks’ gestation in France in 2011: EPIPAGE 2 cohort study
[…] ed as the highest occupational status of the mother and father, or mother only if a single parent, small for gestational age as birth weight <10th centile for gestational age and sex based on French “EPOPé” intrauterine growth curves, and severe neonatal morbidities as severe bronchopulmonary dysplasia, necrotising enterocolitis (Bell stages 2-3), severe retinopathy of prematurity stage >3, or any […]
Impact of preterm birth on infant mortality for newborns with congenital heart defects: The EPICARD population based cohort study
[…] obert Debré, AP-HP, Service de biologie du Développement, Université Paris-Diderot, Paris).François Goffinet (Groupe Hospitalier Cochin-Hôtel Dieu, AP-HP, Maternité Port-Royal et INSERM U1153, Equipe EPOPé, Université Paris Descartes, Paris).Lucile Houyel (Hôpital Marie Lannelongue, Service de chirurgie des cardiopathies congénitales, Le Plessis-Robinson).Jean-Marie Jouannic (Hôpital Trousseau, AP […]
Phylogenetic distribution of plant snoRNA families
[…] cies. SnoRNA clusters were identified by proximities of genomic coordinates.The history of gains and losses in each snoRNA family was reconstructed using a Dollo parsimony approach implemented in the ePoPe programm [].Since the nomenclature of plant snoRNAs only partially respects known or detectable sequence homology we used a unique internal family identifier throughout this study. These identif […]
The Expansion of Animal MicroRNA Families Revisited
[…] Our newly developed software, ePoPE, provides a C implementation of the algorithm outlined in . It is designed specifically for the analysis of gene family data, which are usually available in the form of sequence alignments obtai […]
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