ePoPe statistics

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Citations per year

Number of citations per year for the bioinformatics software tool ePoPe

Tool usage distribution map

This map represents all the scientific publications referring to ePoPe per scientific context
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ePoPe specifications


Unique identifier OMICS_29781
Name ePoPe
Alternative name efficient Prediction of Paralog Evolution
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data An alignment file, a tree file and a weigh array file.
Operating system Unix/Linux
Programming languages C
License GNU General Public License version 3.0
Computer skills Advanced
Version 2.0
Stability Stable
Maintained Yes




No version available


  • person_outline Jana Hertel

ePoPe citations


Neurodevelopmental outcome at 2 years for preterm children born at 22 to 34 weeks’ gestation in France in 2011: EPIPAGE 2 cohort study

PMCID: 5558213
PMID: 28814566
DOI: 10.1136/bmj.j3448

[…] ed as the highest occupational status of the mother and father, or mother only if a single parent, small for gestational age as birth weight <10th centile for gestational age and sex based on French “EPOPé” intrauterine growth curves, and severe neonatal morbidities as severe bronchopulmonary dysplasia, necrotising enterocolitis (Bell stages 2-3), severe retinopathy of prematurity stage >3, or any […]


Impact of preterm birth on infant mortality for newborns with congenital heart defects: The EPICARD population based cohort study

PMCID: 5433049
PMID: 28506266
DOI: 10.1186/s12887-017-0875-z

[…] obert Debré, AP-HP, Service de biologie du Développement, Université Paris-Diderot, Paris).François Goffinet (Groupe Hospitalier Cochin-Hôtel Dieu, AP-HP, Maternité Port-Royal et INSERM U1153, Equipe EPOPé, Université Paris Descartes, Paris).Lucile Houyel (Hôpital Marie Lannelongue, Service de chirurgie des cardiopathies congénitales, Le Plessis-Robinson).Jean-Marie Jouannic (Hôpital Trousseau, AP […]


Phylogenetic distribution of plant snoRNA families

BMC Genomics
PMCID: 5122169
PMID: 27881081
DOI: 10.1186/s12864-016-3301-2

[…] cies. SnoRNA clusters were identified by proximities of genomic coordinates.The history of gains and losses in each snoRNA family was reconstructed using a Dollo parsimony approach implemented in the ePoPe programm [].Since the nomenclature of plant snoRNAs only partially respects known or detectable sequence homology we used a unique internal family identifier throughout this study. These identif […]


The Expansion of Animal MicroRNA Families Revisited

PMCID: 4390885
PMID: 25780960
DOI: 10.3390/life5010905
call_split See protocol

[…] Our newly developed software, ePoPE, provides a C implementation of the algorithm outlined in . It is designed specifically for the analysis of gene family data, which are usually available in the form of sequence alignments obtai […]

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