EricScript specifications

Information


Unique identifier OMICS_07348
Name EricScript
Alternative name chimEric tranScript detection algorithm
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl, R, Shell (Bash)
License GNU General Public License version 2.0
Computer skills Advanced
Version 0.5.1
Stability Stable
Requirements ada, BWA, SAMtools, Bedtools, seqtk, BLAT
Maintained Yes

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Maintainer


  • person_outline Matteo Benelli <>

Publication for chimEric tranScript detection algorithm

EricScript institution(s)
Diagnostic Genetic Unit, Laboratory Department, Careggi University Hospital, Florence, Italy

EricScript review

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Shailesh Kumar

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Desktop
This is a very good tool to find the fusion transcripts in RNA-Seq datasets. I have cited this tool in my publications. We have analysed 10,000 paired-end RNA-Seq datasets with this tool. Very useful.