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ESLpred specifications


Unique identifier OMICS_06614
Name ESLpred
Interface Web user interface
Restrictions to use None
Computer skills Basic
Version 2.0
Stability Stable
Maintained Yes


Publications for ESLpred

ESLpred citations


Genome Wide Identification of the Alba Gene Family in Plants and Stress Responsive Expression of the Rice Alba Genes

PMCID: 5924525
PMID: 29597290
DOI: 10.3390/genes9040183

[…] The subcellular localization was analyzed in silico using BaCelLo [], ESLPred [], YLoc [], PSORT II [], LocTree3 [], WoLF PSORT [], Plant-mPLoc [], and CELLO []. The NCBI database was used to retrieve a 1500-bp DNA sequence from the 5′-upstream region of each Alba gene, […]


Mycobacterium tuberculosis Cpn60.2 (GroEL2) blocks macrophage apoptosis via interaction with mitochondrial mortalin

PMCID: 5399554
PMID: 28288970
DOI: 10.1242/bio.023119

[…] Given the massive export of Cpn60.2 beyond mycobacterial phagosome, we consulted the web servers SLPFA ( and ESLpred ( to define its destinations. SLPFA and ESLpred are frequently consulted for automated prediction of protein subcellular localization () and both pred […]


Predicting Protein Subcellular Localization: Past, Present, and Future

PMCID: 5187447
PMID: 15901249
DOI: 10.1016/S1672-0229(04)02027-3

[…] edicts 14 animal and 17 plant subcellular localizations. Extensions of the PSORT method include: PSORT II (a modified decision algorithm; ref. ) and PSORT-B (with focus on bacterial proteins; ref. ). ESLpred was developed using the Reinhardt and Hubbard data set and is an SVM-based method, which combines the dipeptide composition and PSI-BLAST scores . Drawid and Gerstein presented a method that i […]


A Comparative In Silico Study of the Antioxidant Defense Gene Repertoire of Distinct Lifestyle Trypanosomatid Species

Evol Bioinform Online
PMCID: 5100842
PMID: 27840574
DOI: 10.4137/EBO.S40648

[…] sed on eukaryote models and using default parameters. Only the signal peptide predicted by two programs was considered as valid. Cellular localization was predicted by iPSORT, TargetP, Mito-Prot, and ESLPred2 using default parameters and non-plant or eukaryote prediction models. Subcellular localization equally predicted by at least two methods was considered as valid. […]


Molecular and Bioinformatic Characterization of the Rice ROOT UV B SENSITIVE Gene Family

PMCID: 5059228
PMID: 27730518
DOI: 10.1186/s12284-016-0127-0

[…] unction. There are many reliable bioinformatics tools available to predict protein subcellular localization. Here the subcellular localizations of OsRUSs were predicted by TargetP, Plant-mPloc, Yloc, ESLpred2, TargetLoc and MultiLoc2 (Table ), respectively. OsRUS1 and OsRUS5 were predicted to localize to the chloroplast by all six programs used. Although the subcellular localizations of the other […]


The effector candidate repertoire of the arbuscular mycorrhizal fungus Rhizophagus clarus

BMC Genomics
PMCID: 4746824
PMID: 26861502
DOI: 10.1186/s12864-016-2422-y

[…] with nuclear localization signal (NLS). To find candidate effectors that target the plant nucleus, the R. irregularis secretome was searched for proteins containing a NLS using WoLF PSORT, Nucleo and ESLPred2 (Fungi) software with default parameters [–]. We identified 56 predicted proteins containing at least one NLS (Fig. ). Small and cysteine rich (SCR) proteins. Several known effectors from fun […]

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ESLpred institution(s)
Department of Biotechnology, Panjab University, Chandigarh, India

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