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esyN specifications

Information


Unique identifier OMICS_05687
Name esyN
Alternative name Easy Networks
Restrictions to use None
Maintained Yes

Publication for Easy Networks

esyN citations

 (7)
call_split

Enniatin and Beauvericin Biosynthesis in Fusarium Species: Production Profiles and Structural Determinant Prediction

2017
Toxins
PMCID: 5331425
PMID: 28125067
DOI: 10.3390/toxins9020045
call_split See protocol

[…] The esyn1 sequences of the 13 Fusarium isolates were extracted from the published and unpublished genomes by BLASTN search by querying with the available sequences of F. equiseti (ex scirpi) (NCBI Accessi […]

library_books

An Ancient Yeast for Young Geneticists: A Primer on the Schizosaccharomyces pombe Model System

2015
Genetics
PMCID: 4596657
PMID: 26447128
DOI: 10.1534/genetics.115.181503

[…] of your gene of interest.Physical and genetic interactions are curated in collaboration with BioGRID () and displayed on the PomBase gene pages, and they are also available via network diagrams using esyN (). Physical interactions can link a gene product to processes based on the roles of interacting partners. There are no high-throughput physical interaction data sets for fission yeast at the tim […]

library_books

Depsipeptide Intermediates Interrogate Proposed Biosynthesis of Cereulide, the Emetic Toxin of Bacillus cereus

2015
Sci Rep
PMCID: 4445039
PMID: 26013201
DOI: 10.1038/srep10637

[…] At the C-terminus of the enniatin synthetase (Esyn) gene cluster two PCP domains are located, one catalyzing ester bonds and thereby performing peptide elongation and cyclisation, and another one acting as a waiting position. A similar mechanism […]

library_books

FTO knockdown in rat ventromedial hypothalamus does not affect energy balance

2014
PMCID: 4332191
PMID: 25501432
DOI: 10.14814/phy2.12152

[…] and recombined to generate the entry vectors pENTR‐R4‐miFTO1‐EGFP‐R3, pENTR‐R4‐miFTO2‐EGFP‐R3, pENTR‐R4‐miFTO3‐EGFP‐R3, and pENTR‐R4‐miHcrtr1‐EGFP‐R3. Each entry vectors was recombined with pENTR‐L1‐ESYN‐L4, pENTR‐L3‐oPRE‐L2, and pAAV‐R1‐R2 to generate pAAV‐ESYN‐miFTO1‐EGFP (pAAV‐miFTO#1), pAAV‐ESYN‐miFTO2‐EGFP (pAAV‐miFTO#2), pAAV‐ESYN‐miFTO3‐EGFP (pAAV‐miFTO#3), and pAAV‐ESYN‐miHcrtr1‐EGFP (pAA […]

library_books

Bacillus subtilis as heterologous host for the secretory production of the non ribosomal cyclodepsipeptide enniatin

2014
Appl Microbiol Biotechnol
PMCID: 4306738
PMID: 25398283
DOI: 10.1007/s00253-014-6199-0

[…] Codon usage may exert an influence on gene expression (Nocon et al. ; Samant et al. ). Therefore, we first performed a bioinformatics analysis of the esyn gene. A comparison of the codon usage of the F. oxysporum esyn sequence with the average codon usage of dedicated host B. subtilis 168 showed a mean deviation of about 35 % (Codon Usage Database, […]

library_books

Effects of Synaptic Plasticity on Phase and Period Locking in a Network of Two Oscillatory Neurons

2014
PMCID: 4003516
PMID: 24791223
DOI: 10.1186/2190-8567-4-8

[…] conductances (in nS) are g¯L=2, g¯K=8, g¯Ca=4, the reversal potentials (in mV) are EL=−60, EK=−84, ECa=120 for the leak, potassium and calcium currents, respectively. The synaptic reversal potential Esyn is −80 mV, modeling an inhibitory synapse. Due to the presence of the Heaviside function H(V−Vth), the synapses are all-or-none and activate (deactivate) instantaneously when the presynaptic volt […]

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esyN institution(s)
Cambridge Systems Biology Centre, University of Cambridge, Cambridge, UK

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