Protocols

Eu-Detect specifications

Information


Unique identifier OMICS_10281
Name Eu-Detect
Interface Web user interface
Restrictions to use None
Input format FASTA
Computer skills Basic
Stability No
Maintained No

Maintainer


This tool is not available anymore.

Publication for Eu-Detect

Eu-Detect citation

call_split

Metagenome of the gut of a malnourished child

2011
PMCID: 3115890
PMID: 21599906
DOI: 10.1186/1757-4749-3-7
call_split See protocol

[…] Low quality and short sequences were first removed from both data sets using in-house scripts. Duplicated sequences, a known artifact in pyrosequencing data, were also removed. Using Eu-Detect algorithm (http://metagenomics.atc.tcs.com/Eu-Detect), sequences of probable eukaryotic origin were identified. Sequences originating from human DNA were then identified by performing a BLAS […]

Eu-Detect institution(s)
Bio-Sciences R&D Division, TCS Innovation Labs, Tata Research Development & Design Centre, Tata Consultancy Services Ltd, Maharashtra, India

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