EuGene-PP specifications

Unique identifier:
OMICS_04224
Interface:
Command line interface
Input data:
EuGene-PP can run using just FASTA genomic sequences and expression data (provided as oriented Single/Pair-end reads in either FASTQ/FASTA format, mapped reads in Bam/Sam, Bed or Wig format, or tiling array data in ndf/pair files).
Computer skills:
Advanced
Stability:
Stable
Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux
Version:
1.1
Maintained:
Yes
  • Eubacteria

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Publications

Institution(s)

Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS, France; INRA, Unité de Mathématiques et Informatique Appliques de Toulouse, UR 875, Castanet-Tolosan, France

Funding source(s)

This work was supported by the Agence Nationale de la Recherche ANR-08-GENO-106 grant ‘SYMbiMICS’, in TULIP LabEx (ANR-10-LABX-41).

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